Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Gm12899-201ENSMUST00000120565 551 ntBASIC9.58□□□□□ -0.88
Hoxa3P02831 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Gm6485-201ENSMUST00000160676 439 ntBASIC9.58□□□□□ -0.88
Hoxa3P02831 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Mir8093-201ENSMUST00000185043 137 ntBASIC9.58□□□□□ -0.88
Hoxa3P02831 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Gm9645-201ENSMUST00000197131 792 ntBASIC9.58□□□□□ -0.88
Hoxa3P02831 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hoxa3P02831 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxa3P02831 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxa3P02831 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm22138-201ENSMUST00000158748 128 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm10807-201ENSMUST00000177134 795 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm28388-201ENSMUST00000186262 437 ntBASIC9.57□□□□□ -0.88
Hoxa3P02831 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.57□□□□□ -0.88
Hoxa3P02831 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.57□□□□□ -0.88
Hoxa3P02831 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Hoxa3P02831 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxa3P02831 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms