Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.44□□□□□ -0.74
P01852 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.44□□□□□ -0.74
P01852 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P01852 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.43□□□□□ -0.74
P01852 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.43□□□□□ -0.74
P01852 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
P01852 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.43□□□□□ -0.74
P01852 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.43□□□□□ -0.74
P01852 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
P01852 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.43□□□□□ -0.74
P01852 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.43□□□□□ -0.74
P01852 Gm21092-201ENSMUST00000178995 955 ntBASIC10.43□□□□□ -0.74
P01852 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P01852 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P01852 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.43□□□□□ -0.74
P01852 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.43□□□□□ -0.74
P01852 Gm45118-201ENSMUST00000208928 825 ntBASIC10.43□□□□□ -0.74
P01852 Gm8342-201ENSMUST00000209839 757 ntBASIC10.43□□□□□ -0.74
P01852 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.43□□□□□ -0.74
P01852 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.43□□□□□ -0.74
P01852 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.43□□□□□ -0.74
P01852 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.43□□□□□ -0.74
P01852 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P01852 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
P01852 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P01852 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P01852 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.42□□□□□ -0.74
P01852 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.42□□□□□ -0.74
P01852 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
P01852 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.42□□□□□ -0.74
P01852 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P01852 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
P01852 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.42□□□□□ -0.74
P01852 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.42□□□□□ -0.74
P01852 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Gm12247-201ENSMUST00000117585 670 ntBASIC10.42□□□□□ -0.74
P01852 Gm11836-201ENSMUST00000121022 441 ntBASIC10.42□□□□□ -0.74
P01852 Gm9089-201ENSMUST00000122027 526 ntBASIC10.42□□□□□ -0.74
P01852 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
P01852 Gm4654-201ENSMUST00000183305 982 ntBASIC10.42□□□□□ -0.74
P01852 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
P01852 Gm43186-201ENSMUST00000198130 824 ntBASIC10.42□□□□□ -0.74
P01852 Gm9132-201ENSMUST00000210182 832 ntBASIC10.42□□□□□ -0.74
P01852 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.42□□□□□ -0.74
P01852 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.42□□□□□ -0.74
P01852 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.42□□□□□ -0.74
P01852 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.42□□□□□ -0.74
P01852 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.42□□□□□ -0.74
P01852 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P01852 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.42□□□□□ -0.74
P01852 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P01852 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.42□□□□□ -0.74
P01852 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms