Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Npc1O35604 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Npc1O35604 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Npc1O35604 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Npc1O35604 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.12□□□□□ -0.63
Npc1O35604 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Npc1O35604 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.12□□□□□ -0.63
Npc1O35604 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Npc1O35604 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Npc1O35604 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm14942-201ENSMUST00000119642 336 ntBASIC11.12□□□□□ -0.63
Npc1O35604 Gm11244-201ENSMUST00000121243 237 ntBASIC11.12□□□□□ -0.63
Npc1O35604 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Npc1O35604 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.12□□□□□ -0.63
Npc1O35604 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.12□□□□□ -0.63
Npc1O35604 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.12□□□□□ -0.63
Npc1O35604 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.12□□□□□ -0.63
Npc1O35604 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Npc1O35604 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Olfr584-201ENSMUST00000098210 964 ntBASIC11.12□□□□□ -0.63
Npc1O35604 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Npc1O35604 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.12□□□□□ -0.63
Npc1O35604 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Npc1O35604 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Npc1O35604 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Npc1O35604 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Npc1O35604 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Npc1O35604 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Npc1O35604 Gm12516-201ENSMUST00000120819 385 ntBASIC11.11□□□□□ -0.63
Npc1O35604 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.11□□□□□ -0.63
Npc1O35604 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.11□□□□□ -0.63
Npc1O35604 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Gm6485-201ENSMUST00000160676 439 ntBASIC11.11□□□□□ -0.63
Npc1O35604 Gm23771-201ENSMUST00000178702 110 ntBASIC11.11□□□□□ -0.63
Npc1O35604 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms