Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Gm45113-201ENSMUST00000207518 165 ntBASIC9.94□□□□□ -0.82
Atf6bO35451 Gm6867-201ENSMUST00000219165 425 ntBASIC9.94□□□□□ -0.82
Atf6bO35451 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.94□□□□□ -0.82
Atf6bO35451 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.94□□□□□ -0.82
Atf6bO35451 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Atf6bO35451 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.94□□□□□ -0.82
Atf6bO35451 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Atf6bO35451 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Atf6bO35451 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf6bO35451 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm12165-201ENSMUST00000117047 342 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm12579-201ENSMUST00000118040 783 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm11783-201ENSMUST00000119549 885 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.93□□□□□ -0.82
Atf6bO35451 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Mir3102-201ENSMUST00000175555 104 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.93□□□□□ -0.82
Atf6bO35451 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Ginm1-202ENSMUST00000065124 300 ntBASIC9.93□□□□□ -0.82
Atf6bO35451 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.93□□□□□ -0.82
Atf6bO35451 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf6bO35451 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.92□□□□□ -0.82
Atf6bO35451 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Atf6bO35451 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Atf6bO35451 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Atf6bO35451 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Atf6bO35451 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms