Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.7□□□□□ -0.54
AlyrefO08583 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Gm13505-201ENSMUST00000121666 817 ntBASIC11.7□□□□□ -0.54
AlyrefO08583 Gm11993-201ENSMUST00000121861 820 ntBASIC11.7□□□□□ -0.54
AlyrefO08583 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.7□□□□□ -0.54
AlyrefO08583 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Gm13827-201ENSMUST00000148801 372 ntBASIC11.7□□□□□ -0.54
AlyrefO08583 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Gm8268-201ENSMUST00000209683 458 ntBASIC11.7□□□□□ -0.54
AlyrefO08583 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AlyrefO08583 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
AlyrefO08583 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
AlyrefO08583 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.69□□□□□ -0.54
AlyrefO08583 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
AlyrefO08583 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
AlyrefO08583 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm23612-201ENSMUST00000103823 110 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
AlyrefO08583 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm9673-201ENSMUST00000119287 781 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Gm5970-201ENSMUST00000131638 1216 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
AlyrefO08583 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm23576-201ENSMUST00000179918 110 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.69□□□□□ -0.54
AlyrefO08583 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
AlyrefO08583 CT010480.1-201ENSMUST00000223612 363 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.69□□□□□ -0.54
AlyrefO08583 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
AlyrefO08583 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
AlyrefO08583 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AlyrefO08583 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.68□□□□□ -0.54
AlyrefO08583 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AlyrefO08583 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 304.8 ms