Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.74□□□□□ -0.21
NpcdF8VQB8 Gm17221-201ENSMUST00000163909 481 ntBASIC13.74□□□□□ -0.21
NpcdF8VQB8 Gm17073-201ENSMUST00000168069 556 ntBASIC13.74□□□□□ -0.21
NpcdF8VQB8 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.74□□□□□ -0.21
NpcdF8VQB8 Gm27390-201ENSMUST00000184516 176 ntBASIC13.74□□□□□ -0.21
NpcdF8VQB8 Gm29808-201ENSMUST00000194419 468 ntBASIC13.74□□□□□ -0.21
NpcdF8VQB8 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NpcdF8VQB8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm1826-201ENSMUST00000118646 1162 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm13827-201ENSMUST00000148801 372 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm37851-201ENSMUST00000193871 889 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm42660-201ENSMUST00000197733 947 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm43249-201ENSMUST00000200464 458 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm6518-201ENSMUST00000208450 342 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm26782-203ENSMUST00000227103 751 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.73□□□□□ -0.21
NpcdF8VQB8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NpcdF8VQB8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Cog3-203ENSMUST00000227473 4197 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm8302-201ENSMUST00000119217 852 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm13624-201ENSMUST00000120263 462 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm4943-201ENSMUST00000132879 424 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NpcdF8VQB8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms