Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh11xF6ZNL5 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh11xF6ZNL5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh11xF6ZNL5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh11xF6ZNL5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh11xF6ZNL5 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.57□□□□□ -0.4
Pcdh11xF6ZNL5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Snord17-201ENSMUST00000104526 238 ntBASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Gm8574-201ENSMUST00000203207 924 ntBASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh11xF6ZNL5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm12218-201ENSMUST00000117666 399 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm9089-201ENSMUST00000122027 526 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Mir6546-201ENSMUST00000184460 62 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm17831-201ENSMUST00000205579 900 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh11xF6ZNL5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Pcdh11xF6ZNL5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms