Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Mir7051-201ENSMUST00000184167 73 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm43380-201ENSMUST00000200421 220 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm6722-201ENSMUST00000221586 390 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm8111-201ENSMUST00000117659 987 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm14270-201ENSMUST00000118388 846 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm11340-201ENSMUST00000119226 412 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm9135-201ENSMUST00000182963 990 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm3726-201ENSMUST00000203110 785 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm30671-201ENSMUST00000214898 318 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm5805-201ENSMUST00000072779 456 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Gm25517-201ENSMUST00000083865 134 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.26□□□□□ -0.61
Srp54bE9PXC0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp54bE9PXC0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp54bE9PXC0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms