Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm5472-201ENSMUST00000178604 1678 ntBASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Gm3527-201ENSMUST00000198905 460 ntBASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm8968-201ENSMUST00000199133 1303 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm6238-201ENSMUST00000120999 465 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm43002-201ENSMUST00000200310 155 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm45745-201ENSMUST00000211447 1180 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 AC154461.1-201ENSMUST00000224207 1005 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Gm10238-201ENSMUST00000089689 408 ntBASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hfm1D3Z4R1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm14592-201ENSMUST00000117201 560 ntBASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm13426-201ENSMUST00000117887 795 ntBASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm11473-201ENSMUST00000118980 359 ntBASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm7833-201ENSMUST00000183288 990 ntBASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm29689-201ENSMUST00000221076 589 ntBASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Gm6560-201ENSMUST00000198588 1591 ntBASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hfm1D3Z4R1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gm7405-201ENSMUST00000121476 1337 ntBASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gm14176-201ENSMUST00000121302 477 ntBASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gm27833-201ENSMUST00000184285 124 ntBASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Ighv1-86-201ENSMUST00000200562 353 ntBASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms