Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim30cD3YVI9 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim30cD3YVI9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim30cD3YVI9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim30cD3YVI9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim30cD3YVI9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm23200-201ENSMUST00000104379 132 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm4607-201ENSMUST00000206649 577 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim30cD3YVI9 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm11511-201ENSMUST00000118146 540 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm12266-201ENSMUST00000120311 962 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm17040-202ENSMUST00000170597 889 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm26461-201ENSMUST00000175064 290 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm18038-201ENSMUST00000197900 485 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim30cD3YVI9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms