Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Usf3B2RUQ2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usf3B2RUQ2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Usf3B2RUQ2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Usf3B2RUQ2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm9645-201ENSMUST00000197131 792 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm43002-201ENSMUST00000200310 155 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 AC140375.1-201ENSMUST00000225421 694 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm6630-201ENSMUST00000119199 454 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm11836-201ENSMUST00000121022 441 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm5257-201ENSMUST00000121823 790 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm21092-201ENSMUST00000178995 955 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usf3B2RUQ2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm24891-201ENSMUST00000104391 136 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm22711-201ENSMUST00000116890 133 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm27910-201ENSMUST00000185004 107 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm42657-201ENSMUST00000201746 211 ntBASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Usf3B2RUQ2 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms