Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm14274-201ENSMUST00000117182 615 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm13019-201ENSMUST00000120000 276 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm16459-201ENSMUST00000121443 686 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Mir1893-201ENSMUST00000122565 83 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm43564-201ENSMUST00000196185 211 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm43969-201ENSMUST00000204833 535 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm18014-201ENSMUST00000183369 817 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm5178-201ENSMUST00000219380 898 ntBASIC12.57□□□□□ -0.4
Scn3aA2ASI5 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn3aA2ASI5 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm14234-201ENSMUST00000119539 845 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm9372-201ENSMUST00000168454 430 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm7589-201ENSMUST00000085631 534 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm15196-201ENSMUST00000121406 482 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm17214-201ENSMUST00000164501 541 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Mir6941-201ENSMUST00000184711 59 ntBASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn3aA2ASI5 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms