Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm13047-201ENSMUST00000117116 815 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm11801-201ENSMUST00000117807 746 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm11960-201ENSMUST00000122068 925 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm8574-201ENSMUST00000203207 924 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm7940-201ENSMUST00000218195 769 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gm25201-201ENSMUST00000083093 170 ntBASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cfap99A0A140LIX9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Gm15615-201ENSMUST00000118876 198 ntBASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cfap99A0A140LIX9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms