Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Olfml3-204ENSMUST00000169286 874 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm7741-201ENSMUST00000181445 989 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm37835-201ENSMUST00000193305 361 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm9353-201ENSMUST00000200472 604 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb2S4R1M3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm10774-201ENSMUST00000188689 204 ntBASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
H2afb2S4R1M3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm22711-201ENSMUST00000116890 133 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm15617-201ENSMUST00000118973 771 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm22846-201ENSMUST00000157706 270 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm2517-201ENSMUST00000215651 348 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Ginm1-202ENSMUST00000065124 300 ntBASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms