Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.27□□□□□ -0.76
H2afb3S4R1G7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
H2afb3S4R1G7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
H2afb3S4R1G7 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
H2afb3S4R1G7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm25890-201ENSMUST00000177643 165 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm22614-201ENSMUST00000178300 165 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm43630-201ENSMUST00000201550 776 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm45433-201ENSMUST00000209386 247 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm5186-201ENSMUST00000218781 920 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm22042-201ENSMUST00000082989 165 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm26110-201ENSMUST00000083971 165 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H2afb3S4R1G7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.26□□□□□ -0.77
H2afb3S4R1G7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms