Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac6Q9Z2V5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm24279-201ENSMUST00000104236 131 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm12986-201ENSMUST00000119037 967 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm6630-201ENSMUST00000119199 454 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm16547-201ENSMUST00000159474 293 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm18733-202ENSMUST00000174447 401 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm8384-201ENSMUST00000190905 704 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm42867-201ENSMUST00000202995 469 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm45527-201ENSMUST00000211052 774 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm6331-201ENSMUST00000217890 450 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac6Q9Z2V5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gm23769-201ENSMUST00000104441 121 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gm9166-201ENSMUST00000120293 561 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gm13827-201ENSMUST00000148801 372 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Mir8091-201ENSMUST00000183602 139 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gm9353-201ENSMUST00000200472 604 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac6Q9Z2V5 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac6Q9Z2V5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac6Q9Z2V5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac6Q9Z2V5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac6Q9Z2V5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms