Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm18893-201ENSMUST00000198416 943 ntBASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm19287-201ENSMUST00000203190 358 ntBASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl40Q9Z2Q5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl40Q9Z2Q5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms