Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm23771-201ENSMUST00000178702 110 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm7467-201ENSMUST00000185173 652 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm43947-201ENSMUST00000203019 959 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm13422-201ENSMUST00000118834 504 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Mir1943-201ENSMUST00000158276 73 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm6485-201ENSMUST00000160676 439 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm9550-201ENSMUST00000161130 862 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm27910-201ENSMUST00000185004 107 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm43520-201ENSMUST00000197996 164 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Snora73b-201ENSMUST00000083419 205 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Upk3aQ9JKX8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms