Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3a3Q9D554 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.46□□□□□ -0.58
Sf3a3Q9D554 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sf3a3Q9D554 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm25043-201ENSMUST00000158604 212 ntBASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm5866-201ENSMUST00000177881 973 ntBASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm29649-201ENSMUST00000185649 419 ntBASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm8515-201ENSMUST00000194852 576 ntBASIC11.45□□□□□ -0.58
Sf3a3Q9D554 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sf3a3Q9D554 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms