Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gm29127-201ENSMUST00000188304 517 ntBASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Gm43966-201ENSMUST00000203301 612 ntBASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Erich3-203ENSMUST00000189969 3460 ntBASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim42Q9D2H5 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm13875-201ENSMUST00000120162 282 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm7722-201ENSMUST00000120646 741 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm14832-201ENSMUST00000121289 322 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm38216-201ENSMUST00000194872 1214 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 AC154828.2-201ENSMUST00000220908 1070 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim42Q9D2H5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim42Q9D2H5 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms