Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm11246-201ENSMUST00000120880 345 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm27910-201ENSMUST00000185004 107 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm35960-201ENSMUST00000202712 767 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm44980-201ENSMUST00000205826 314 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm8342-201ENSMUST00000209839 757 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm45525-201ENSMUST00000210800 389 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Snora73b-201ENSMUST00000083419 205 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Otud1Q9CUB6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm12656-201ENSMUST00000118149 577 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm13888-201ENSMUST00000119148 422 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm23771-201ENSMUST00000178702 110 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm37981-201ENSMUST00000194280 535 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm43520-201ENSMUST00000197996 164 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.93□□□□□ -0.66
Otud1Q9CUB6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms