Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm7Q9CQQ8 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Olfml3-204ENSMUST00000169286 874 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm6407-201ENSMUST00000176468 549 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm42816-201ENSMUST00000198433 325 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm44158-201ENSMUST00000203881 505 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm7Q9CQQ8 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm22846-201ENSMUST00000157706 270 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm8492-201ENSMUST00000182375 987 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Mt1-202ENSMUST00000211807 1085 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms