Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm9540-201ENSMUST00000188230 478 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm6108-201ENSMUST00000208365 367 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm19208-201ENSMUST00000213861 912 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Ntng1-201ENSMUST00000051253 327 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Bhlhe41Q99PV5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm23251-201ENSMUST00000103773 110 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm13809-201ENSMUST00000117921 597 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm18827-201ENSMUST00000188341 790 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm29499-201ENSMUST00000189151 486 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm28329-201ENSMUST00000191208 689 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm29171-201ENSMUST00000191397 486 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm43966-201ENSMUST00000203301 612 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Bhlhe41Q99PV5 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Bhlhe41Q99PV5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Bhlhe41Q99PV5 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms