Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm25881-201ENSMUST00000157783 103 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm25732-201ENSMUST00000175168 60 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.17□□□□□ -0.62
Trim16Q99PP9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trim16Q99PP9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm8566-201ENSMUST00000120174 465 ntBASIC11.16□□□□□ -0.62
Trim16Q99PP9 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.16□□□□□ -0.62
Trim16Q99PP9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.16□□□□□ -0.62
Trim16Q99PP9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trim16Q99PP9 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim16Q99PP9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim16Q99PP9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms