Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm12947-201ENSMUST00000116114 420 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm26943-201ENSMUST00000182295 957 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm34248-201ENSMUST00000200027 474 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm23555-201ENSMUST00000157815 135 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm22994-201ENSMUST00000175422 82 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm17799-201ENSMUST00000183270 667 ntBASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh23Q99PF4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm15570-201ENSMUST00000122093 625 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 n-R5s154-201ENSMUST00000122513 108 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm28180-201ENSMUST00000189608 722 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm5311-201ENSMUST00000203518 709 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 AC124772.3-201ENSMUST00000222535 575 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm28746-201ENSMUST00000187453 380 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Gm9790-201ENSMUST00000054148 288 ntBASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh23Q99PF4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm25804-201ENSMUST00000122785 188 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh23Q99PF4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms