Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm14277-201ENSMUST00000121195 360 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm270-201ENSMUST00000223010 976 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rnf111Q99ML9 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm23596-201ENSMUST00000104304 132 ntBASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.06□□□□□ -0.64
Rnf111Q99ML9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf111Q99ML9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf111Q99ML9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms