Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm11993-201ENSMUST00000121861 820 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm26368-201ENSMUST00000157826 118 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm37782-201ENSMUST00000194879 678 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clp1Q99LI9 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm11893-201ENSMUST00000117829 491 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm11475-201ENSMUST00000118482 476 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm3828-201ENSMUST00000121817 257 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm27956-201ENSMUST00000175604 260 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm43506-201ENSMUST00000200675 753 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gm7589-201ENSMUST00000085631 534 ntBASIC12.05□□□□□ -0.48
Clp1Q99LI9 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clp1Q99LI9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.04□□□□□ -0.48
Clp1Q99LI9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms