Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm6108-201ENSMUST00000208365 367 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Erich3-203ENSMUST00000189969 3460 ntBASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cstf3Q99LI7 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.02□□□□□ -0.64
Cstf3Q99LI7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm7150-201ENSMUST00000122032 981 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm23085-201ENSMUST00000157849 293 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm18734-201ENSMUST00000172937 808 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm20495-201ENSMUST00000173902 235 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm27530-201ENSMUST00000184096 98 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cstf3Q99LI7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm12501-201ENSMUST00000119163 529 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm13263-201ENSMUST00000121271 838 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms