Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm6758-201ENSMUST00000119643 1055 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm15982-201ENSMUST00000121681 554 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Snord55-201ENSMUST00000174939 79 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm6564-201ENSMUST00000075377 619 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Gm42970-201ENSMUST00000196407 1352 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RtcbQ99LF4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC14.06□□□□□ -0.16
RtcbQ99LF4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RtcbQ99LF4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.05□□□□□ -0.16
RtcbQ99LF4 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Gm37207-201ENSMUST00000194284 296 ntBASIC14.05□□□□□ -0.16
RtcbQ99LF4 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.05□□□□□ -0.16
RtcbQ99LF4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RtcbQ99LF4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RtcbQ99LF4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms