Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Mir6407-201ENSMUST00000184510 101 ntBASIC13.24□□□□□ -0.29
Smc1bQ920F6 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.24□□□□□ -0.29
Smc1bQ920F6 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.24□□□□□ -0.29
Smc1bQ920F6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.24□□□□□ -0.29
Smc1bQ920F6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm25766-201ENSMUST00000104101 131 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm15004-201ENSMUST00000119192 630 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm26134-201ENSMUST00000178484 110 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm9135-201ENSMUST00000182963 990 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.23□□□□□ -0.29
Smc1bQ920F6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smc1bQ920F6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm11354-201ENSMUST00000121974 422 ntBASIC13.22□□□□□ -0.29
Smc1bQ920F6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm12407-201ENSMUST00000180219 324 ntBASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm45856-201ENSMUST00000212752 416 ntBASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.22□□□□□ -0.29
Smc1bQ920F6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smc1bQ920F6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm12218-201ENSMUST00000117666 399 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm4310-201ENSMUST00000177847 889 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm18460-201ENSMUST00000208088 464 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm45500-201ENSMUST00000211676 803 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms