Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm12616-201ENSMUST00000118594 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm15352-201ENSMUST00000118696 270 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm8737-201ENSMUST00000122208 642 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm9550-201ENSMUST00000161130 862 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12624-201ENSMUST00000177615 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12621-201ENSMUST00000177760 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12615-201ENSMUST00000177970 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12622-201ENSMUST00000177975 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12627-201ENSMUST00000178412 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12625-201ENSMUST00000179122 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12614-201ENSMUST00000179586 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm12613-201ENSMUST00000180323 382 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm17831-201ENSMUST00000205579 900 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm4978-201ENSMUST00000071565 801 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Gm14263-201ENSMUST00000117955 746 ntBASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Gm43966-201ENSMUST00000203301 612 ntBASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdha3Q91Y16 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm15881-201ENSMUST00000148792 942 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm24844-201ENSMUST00000158679 127 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm3329-201ENSMUST00000159873 556 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms