Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb1Q91Y08 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Pcdhb1Q91Y08 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.83□□□□□ -0.51
Pcdhb1Q91Y08 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdhb1Q91Y08 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Pcdhb1Q91Y08 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm25148-201ENSMUST00000104611 123 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm22902-201ENSMUST00000158488 302 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Mir6979-201ENSMUST00000183927 56 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm8574-201ENSMUST00000203207 924 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Olfr584-201ENSMUST00000098210 964 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb1Q91Y08 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm9089-201ENSMUST00000122027 526 ntBASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm18367-201ENSMUST00000176139 600 ntBASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms