Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm6334-201ENSMUST00000207083 228 ntBASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm32025-201ENSMUST00000217960 307 ntBASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Rims2-204ENSMUST00000226410 3685 ntBASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdhb3Q91XZ7 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb3Q91XZ7 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm42462-201ENSMUST00000196543 1363 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms