Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm43852-201ENSMUST00000202098 917 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gm12218-201ENSMUST00000117666 399 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gm29067-201ENSMUST00000190821 470 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gm37981-201ENSMUST00000194280 535 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Spcs1-203ENSMUST00000226374 592 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.69□□□□□ -0.54
Pcdhb6Q91XZ4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15528-201ENSMUST00000117821 864 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm11956-201ENSMUST00000119525 512 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm23699-201ENSMUST00000158835 135 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm43186-201ENSMUST00000198130 824 ntBASIC11.68□□□□□ -0.54
Pcdhb6Q91XZ4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms