Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm3828-201ENSMUST00000121817 257 ntBASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm18204-201ENSMUST00000209835 793 ntBASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.02□□□□□ -0.33
Trex1Q91XB0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.02□□□□□ -0.33
Trex1Q91XB0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.02□□□□□ -0.33
Trex1Q91XB0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trex1Q91XB0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm13047-201ENSMUST00000117116 815 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm11578-201ENSMUST00000118530 459 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm14165-201ENSMUST00000121456 952 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm20392-201ENSMUST00000173047 701 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Mir7035-201ENSMUST00000184713 82 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm9487-201ENSMUST00000216600 472 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.01□□□□□ -0.33
Trex1Q91XB0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trex1Q91XB0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13□□□□□ -0.33
Trex1Q91XB0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Gm6157-201ENSMUST00000199935 1897 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Gm5641-201ENSMUST00000091130 1488 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13□□□□□ -0.33
Trex1Q91XB0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Gm14993-201ENSMUST00000121180 164 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trex1Q91XB0 Gm22846-201ENSMUST00000157706 270 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Gm17221-201ENSMUST00000163909 481 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Gm17073-201ENSMUST00000168069 556 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Gm17070-201ENSMUST00000170463 784 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13□□□□□ -0.33
Trex1Q91XB0 Gm42660-201ENSMUST00000197733 947 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms