Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm13916-201ENSMUST00000117368 628 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm12266-201ENSMUST00000120311 962 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm18734-201ENSMUST00000172937 808 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm20495-201ENSMUST00000173902 235 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm6867-201ENSMUST00000219165 425 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
H1fooQ8VIK3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm24891-201ENSMUST00000104391 136 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm15808-201ENSMUST00000119046 604 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm23085-201ENSMUST00000157849 293 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms