Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm22846-201ENSMUST00000157706 270 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm20495-201ENSMUST00000173902 235 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm25890-201ENSMUST00000177643 165 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm22614-201ENSMUST00000178300 165 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm43758-201ENSMUST00000199500 367 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm22042-201ENSMUST00000082989 165 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm26110-201ENSMUST00000083971 165 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim60Q8VI40 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.78□□□□□ -0.52
Trim60Q8VI40 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim60Q8VI40 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim60Q8VI40 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim60Q8VI40 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.77□□□□□ -0.52
Trim60Q8VI40 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.77□□□□□ -0.52
Trim60Q8VI40 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim60Q8VI40 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim60Q8VI40 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim60Q8VI40 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim60Q8VI40 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.77□□□□□ -0.53
Trim60Q8VI40 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gm25668-201ENSMUST00000157700 129 ntBASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.77□□□□□ -0.53
Trim60Q8VI40 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim60Q8VI40 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.77□□□□□ -0.53
Trim60Q8VI40 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.77□□□□□ -0.53
Trim60Q8VI40 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim60Q8VI40 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms