Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm13408-201ENSMUST00000119822 798 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm13935-201ENSMUST00000121859 798 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm5451-201ENSMUST00000080545 579 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Gm23251-201ENSMUST00000103773 110 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Gm15573-201ENSMUST00000119487 540 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Mir8115-201ENSMUST00000184992 119 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Gm45398-201ENSMUST00000210561 165 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.86□□□□□ -0.67
CroccQ8CJ40 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CroccQ8CJ40 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CroccQ8CJ40 Gm11331-201ENSMUST00000119764 288 ntBASIC10.85□□□□□ -0.67
CroccQ8CJ40 Gm24992-201ENSMUST00000157412 130 ntBASIC10.85□□□□□ -0.67
CroccQ8CJ40 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CroccQ8CJ40 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.85□□□□□ -0.67
CroccQ8CJ40 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CroccQ8CJ40 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.85□□□□□ -0.67
CroccQ8CJ40 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.85□□□□□ -0.67
CroccQ8CJ40 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CroccQ8CJ40 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms