Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.05□□□□□ -0.16
Smc5Q8CG46 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smc5Q8CG46 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC14.04□□□□□ -0.16
Smc5Q8CG46 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gm37301-201ENSMUST00000195412 568 ntBASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gm5302-201ENSMUST00000202130 796 ntBASIC14.04□□□□□ -0.16
Smc5Q8CG46 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smc5Q8CG46 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm8100-201ENSMUST00000182906 988 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm37597-201ENSMUST00000191853 382 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Igkv2-116-201ENSMUST00000199327 362 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm43822-201ENSMUST00000200285 476 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm3961-201ENSMUST00000204425 994 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm17825-201ENSMUST00000206836 794 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gm6108-201ENSMUST00000208365 367 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.03□□□□□ -0.16
Smc5Q8CG46 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smc5Q8CG46 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 AA474408-201ENSMUST00000098110 3339 ntBASIC14.02□□□□□ -0.16
Smc5Q8CG46 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.02□□□□□ -0.16
Smc5Q8CG46 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc5Q8CG46 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc5Q8CG46 Gm25881-201ENSMUST00000157783 103 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms