Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm18730-201ENSMUST00000218038 343 ntBASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Gm28581-201ENSMUST00000186086 2177 ntBASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc38Q8CDN8 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc38Q8CDN8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Gm12579-201ENSMUST00000118040 783 ntBASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Gm10288-201ENSMUST00000084614 537 ntBASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc38Q8CDN8 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms