Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Gm24990-201ENSMUST00000157406 323 ntBASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Rps4l-202ENSMUST00000204242 789 ntBASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lrif1Q8CDD9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lrif1Q8CDD9 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm25700-201ENSMUST00000177693 110 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gzmn-202ENSMUST00000225535 989 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lrif1Q8CDD9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lrif1Q8CDD9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms