Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Gm10478-201ENSMUST00000084451 396 ntBASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lysmd4Q8CC84 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm14109-201ENSMUST00000118814 309 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm11573-201ENSMUST00000119956 394 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm27046-201ENSMUST00000182160 463 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm32999-201ENSMUST00000192693 562 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm21769-201ENSMUST00000211922 111 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm9368-201ENSMUST00000219348 831 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lysmd4Q8CC84 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lysmd4Q8CC84 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms