Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm9645-201ENSMUST00000197131 792 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Snora73b-201ENSMUST00000083419 205 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp44Q8C2S0 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm13422-201ENSMUST00000118834 504 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Mir3102-201ENSMUST00000175555 104 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm23771-201ENSMUST00000178702 110 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm8197-202ENSMUST00000193422 934 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm42997-202ENSMUST00000200321 985 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm8959-201ENSMUST00000213150 571 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp44Q8C2S0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm37986-201ENSMUST00000193285 383 ntBASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm18753-201ENSMUST00000201000 566 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms