Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm19353-201ENSMUST00000184561 445 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm15352-201ENSMUST00000118696 270 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm13045-201ENSMUST00000119019 712 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm9089-201ENSMUST00000122027 526 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm22144-201ENSMUST00000157402 102 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm22846-201ENSMUST00000157706 270 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm9555-201ENSMUST00000200908 583 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm42867-201ENSMUST00000202995 469 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trub1Q8C0D0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trub1Q8C0D0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms