Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ttc28Q80XJ3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Ttc28Q80XJ3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ttc28Q80XJ3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Ttc28Q80XJ3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm15707-201ENSMUST00000118804 996 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm14052-201ENSMUST00000121434 1031 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm25872-201ENSMUST00000177784 100 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm3635-201ENSMUST00000212314 354 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm18041-201ENSMUST00000218210 618 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm25580-201ENSMUST00000083409 327 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm6441-201ENSMUST00000120983 696 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Gm2474-201ENSMUST00000195162 559 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ttc28Q80XJ3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm25148-201ENSMUST00000104611 123 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Cd9-ps-201ENSMUST00000174687 650 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm42660-201ENSMUST00000197733 947 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm7589-201ENSMUST00000085631 534 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Gm5507-201ENSMUST00000091897 1008 ntBASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ttc28Q80XJ3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms