Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Gm30671-201ENSMUST00000214898 318 ntBASIC10.93□□□□□ -0.66
Vrk1Q80X41 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Gm25201-201ENSMUST00000083093 170 ntBASIC10.93□□□□□ -0.66
Vrk1Q80X41 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vrk1Q80X41 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vrk1Q80X41 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm4294-201ENSMUST00000105169 614 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm16219-201ENSMUST00000120096 274 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm11960-201ENSMUST00000122068 925 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm43163-201ENSMUST00000196571 442 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm43380-201ENSMUST00000200421 220 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gm35713-201ENSMUST00000210516 199 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Mir483-201ENSMUST00000093631 73 ntBASIC10.92□□□□□ -0.66
Vrk1Q80X41 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vrk1Q80X41 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.91□□□□□ -0.66
Vrk1Q80X41 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.91□□□□□ -0.66
Vrk1Q80X41 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.91□□□□□ -0.66
Vrk1Q80X41 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vrk1Q80X41 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms