Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Gm22616-201ENSMUST00000179783 100 ntBASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Gm8162-201ENSMUST00000213951 665 ntBASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 AC155300.1-201ENSMUST00000219134 480 ntBASIC9.61□□□□□ -0.87
Ubr5Q80TP3 AC127583.1-201ENSMUST00000224351 540 ntBASIC9.61□□□□□ -0.87
Ubr5Q80TP3 AC114585.2-201ENSMUST00000227693 486 ntBASIC9.61□□□□□ -0.87
Ubr5Q80TP3 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr5Q80TP3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm24161-201ENSMUST00000104592 130 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm6517-201ENSMUST00000121056 511 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm18299-201ENSMUST00000192026 636 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 AC165092.1-201ENSMUST00000224018 486 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Mir8111-201ENSMUST00000184463 137 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Elobl-202ENSMUST00000082339 300 ntBASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ubr5Q80TP3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Gm15033-201ENSMUST00000118188 673 ntBASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Gm6276-201ENSMUST00000120159 579 ntBASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Gm43965-201ENSMUST00000203779 789 ntBASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Gm8960-201ENSMUST00000219787 788 ntBASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Rce1-203ENSMUST00000224707 1255 ntBASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr5Q80TP3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms