Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.08□□□□□ -0.47
Prpf38bQ80SY5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm11509-201ENSMUST00000117358 325 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm15566-201ENSMUST00000121130 590 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm14126-201ENSMUST00000122345 395 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm22846-201ENSMUST00000157706 270 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm29499-201ENSMUST00000189151 486 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm28329-201ENSMUST00000191208 689 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm29171-201ENSMUST00000191397 486 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm9723-201ENSMUST00000192100 457 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf38bQ80SY5 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Rprl1-201ENSMUST00000158050 327 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm6644-201ENSMUST00000186507 951 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm40879-201ENSMUST00000220759 612 ntBASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Prpf38bQ80SY5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf38bQ80SY5 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms