Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh8Q7TSK3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Mir6958-201ENSMUST00000184207 73 ntBASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm19009-201ENSMUST00000223072 823 ntBASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh8Q7TSK3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm11700-201ENSMUST00000119409 403 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm11960-201ENSMUST00000122068 925 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm37028-201ENSMUST00000194276 107 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm37905-201ENSMUST00000195310 341 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.26□□□□□ -0.61
Pcdh8Q7TSK3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms