Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm9166-201ENSMUST00000120293 561 ntBASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm14113-201ENSMUST00000121399 976 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Snord55-201ENSMUST00000174939 79 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm19927-201ENSMUST00000185792 781 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm19918-201ENSMUST00000194858 400 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm18010-201ENSMUST00000203553 202 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm45527-201ENSMUST00000211052 774 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm9204-201ENSMUST00000212641 947 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Gm10020-201ENSMUST00000081993 612 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ddx55Q6ZPL9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ddx55Q6ZPL9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm24279-201ENSMUST00000104236 131 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm16547-201ENSMUST00000159474 293 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms